Biomni

General-purpose biomedical agent combining LLM planning with code execution

What Biomni does

  • General-purpose biomedical agent combining LLM planning with code execution
  • Integrates 150+ bioinformatics tools and 59 databases
  • Web interface so biologists can use it without coding
  • Open-source from Stanford SNAP lab

Biomni — straight answers

What is Biomni?

Biomni is listed under Science & Research AI, in the Research & Learning category on Flocci AI Tools. General-purpose biomedical agent combining LLM planning with code execution. It is free, with no paid plan attached, and it lives at github.com.

Is Biomni free?

Biomni is listed as fully free — there is no paid tier attached to it in the catalog. That makes it one of the 397 entries on Flocci AI Tools with no upgrade path built in.

Can I use Biomni in a browser, or is there an app?

Biomni works in a normal browser tab with no install. It is available on self-hosting and the web.

What can Biomni do?

Biomni does 4 things the catalog singles out: General-purpose biomedical agent combining llm planning with code execution; integrates 150+ bioinformatics tools and 59 databases; web interface so biologists can use it without coding; open-source from stanford snap lab.

What is the best free alternative to Biomni?

AlphaFold Server is the closest free alternative: it sits in the same Science & Research AI sub-category and is free. AI Scientist-v2, Boltz and Evo 2 also start free. The full list is on the alternatives page.

See the full list →

Biomni alternatives

Compare all alternatives →

AlphaFold Server

Science & Research AI
free
  • Free browser-based access to AlphaFold 3-class structure prediction for non-commercial research
  • Predicts structure/interactions of proteins, DNA, RNA, ligands in one model
  • Backed by the AlphaFold Protein Structure Database of 200M+ predicted structures

Boltz

Science & Research AI
free
  • First fully open-source model to approach AlphaFold3-level structure prediction, MIT-licensed
  • Boltz-2 adds binding-affinity prediction, not just structure
  • Hostable free via community web apps (e.g. Tamarind Bio) or run locally

Chai-1 (Chai Discovery)

Science & Research AI
freemium
  • Chai-1 is free, Apache-2.0-licensed for academic and commercial use — a genuinely open structure-prediction model
  • Chai-2 (paid, enterprise) generates de novo antibodies directly from target epitopes, used by Lilly, Novartis, Pfizer
  • Autonomous AI agent that runs literature review + data analysis cycles, condensing ~6 months of research into a day per vendor
  • Publicly available via web interface and API, not an internal-only research demo
  • Kosmos itself requires a paid subscription; the free plan covers only standard agents.

Evo 2

Science & Research AI
free
  • DNA language model at single-nucleotide resolution with 1M base-pair context
  • Variant effect prediction, sequence completion and genome design
  • Free hosted 40B access via NVIDIA build.nvidia.com
  • Apache 2.0 code, weights and training data open; published in Nature

AI Scientist-v2

Science & Research AI
free
  • Agentic tree search proposes ideas, runs experiments and writes papers
  • No human-authored templates needed
  • Open code from Sakana AI
  • Requires disclosure of AI use in resulting papers

Head-to-head comparisons